BioMEMS

Research that includes:

  • Immunosensors
  • Single Cell Analysis
  • Cell Manipulation and Probing
  • SERS BioImaging
  • Micro Total Analysis Systems uTAS
  • DNA Transformations
  • Cell Cryropreservation
  • Optoelectronic Transport & Tweezers

BPN449: Plasmon Engineering the Nanocrescent

Benjamin Ross
2008

We present a systematic numerical study of plasmon resonance in the nanocrescent. We show that by varying the nanocrescent geometry, the plasmon resonance peak can be tuned into the near-infrared and local field enhancement can be increased significantly. Because its wide tunability, high local field enhancement, and geometry which utilizes both a sharp edge and intra-particle coupling, the nanocrescent is a structure well-suited for in vivo biological applications.

Project end date: 08/12/08

BPN340: Single Cell Differential Impedance Spectroscopy Analysis Using High Density Hydrodynamic Cell Trapping Arrays

J. Tanner Nevill
Daniele Malleo
2008

Cells are usually studied in bulk quantities: they are suspended in a cell culture mixture and this suspension is usually analyzed. However, uncertainties and difficulties arise from the study of mixtures and volume fractions: for example it is extremely difficult if not impossible to discover a single cancerous cell in a population of healthy cells. It is immediately obvious that the study of individually-addressed cells can enhance our understanding of their structure and behavior. Here we present a device that allows the trapping, manipulation and simultaneous electrical/optical...

BPN355: Microfluidic Cell Analysis Platform: On Chip Cell Culture and Electrochemical Lysis

J. Tanner Nevill
2008

Cultured cells are used in a variety of contexts ranging from high throughput screening of drugs to systems biology. Microfluidic devices for cell culture studies offer numerous advantages over plate-based cell culture, and because of this, are being increasingly used in laboratory settings.4,5 Microfluidic devices can provide physiologically relevant microenvironments by allowing for constant perfusion and 3D tissue-like structure. Additionally, time and costs are reduced due to decreased reagent volumes and automated handling. Higher surface-to-volume ratios can also offer improved...

BPN430: In-vivo Cellular Mapping of Biological Activity by Quantized Plasmon Quenching Dips Nanospectroscopy

Liz Y. Wu
Yeonho Choi
2008

In a biological cell, enzyme systems play an important role since they direct the metabolism of the cell by controlling all processes to occur at a specific rate. One of the important research fields in cell biology is to investigate the structure and function of complex enzyme systems. However, the dynamic activities of enzymes in a living cell are hard to record. In this project, we probe NADH-Cytochrome b5 Reductase enzyme activity in a living cell by quantized plasmon quenching dips nanospectroscopy, a technology we developed earlier to detect the type of molecules conjugated on...

BPN417: Spatially Targeted Microfluidic Stimulation for Quantitative Gap Junction Analysis

Sisi Chen
2008

Gap junctions are expressed in most mammalian cells, coupling their intracellular environments to allow direct communication of ions, metabolites, and other small molecules. Although gap junctions have been implicated in a range of diseases from neuronal degeneration to cancer, our understanding of their function is still incomplete. We present here the application of a microfluidic device for assaying gap junction communication by focusing dye molecules or other membrane diffusiblefocusing dye molecules or other membrane diffusible biomolecules over cells cultured to confluence. A...

BPN407: Modular-Based Integration of CMOS Chip with Microfluidics for Immunosensing

Amy Wu
Lisen Wang
2008

The project aims to develop an integration method for CMOS chip and microfluidics, specifically for immunosensing system with microfluidic system for sample preparation and CMOS magnetic sensor for detection. Solving the size mismatch between CMOS chip (typically mm scale) and microfluidics (cm scale) while maintaining the functionality and interconnect metallization of CMOS, as well as seamlessly delivery the fluid to the sensor surface on the CMOS chip through microfluidics are the key considerations for the integration. On the other hand, the integrated biosensor will be a...

BPN476: Integrated Plasmonic Optical Trapping (iPOT)

John R. Waldeisen
Benjamin M. Ross
2008

We are developing a multiplexed integrated plasmonic optical trapping (iPOT) device, which has the capability of optically modulated size-selective cellular trapping. This device utilizes the non-uniform radiation forces generated on a localized cell body of certain dielectric properties by the scattered electromagnetic field when an array of integrated nanoplasmonic structures is irradiated with white light (or a specific NIR laser). The trapping capability is maximized by tuning the plasmon resonance frequency of the integrated nanostructures in tightly packed, high density...

BPN478: Synthetic Microbial Pattern Formation Modulated by a Chemical Micro-interface

Taesung Kim
2009

We develop a technique for producing synthetic microbial patterns by means of direct activation and inactivation of gene expression in an initially homogenous population of cells using a microfluidic chemical interface system. A strain of E. coli was engineered such that the presence of the membrane diffusible molecule acyl-homoserine lactone (AHL) activates the production of more AHL, thereby creating a positive feedback loop. Since the half-life of AHL decreases in high pH solutions, this feedback loop can be inhibited in a specific area by modulating the local pH using a...

BPN509: Plasmonic Transfection With Single Cell Resolution

Adrian M.E. Sprenger
2009

Plasmonic transfection with single cell resolution can greatly benefit studies of the dynamic between a single cell and its surrounding tissue. We will develop a photoactive nano structured substrate for culture of adherent cells that enables transfection with single cell resolution, maximum cell viability and minimum expenses.

Project end date: 08/11/09

DAH5: Bioassay Based on Magnetic Recording Technology

Mei-Lin Chan
2009

This project aims to develop a magnetic scanning probe microscope based on a magnetic tunnel junction (MTJ) sensor for the detection of magnetically-labeled biomolecules. Paramagnetic particles are employed as markers and incorporated with commercial DNA microarray technology to produce magnetically labeled DNA microarrays. An external magnetic tunnel junction is mechanically scanned across these arrays to detect and map out the localized magnetic fields from these particles. This new approach offers the potential to image centimeter-scale arrays of thousands of DNA spots while still...